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ICTR Core Services Request Form

The ICTR offers a variety of services through the following service/recharge centers: Bioinformatics Core, Biostatistics Core, Datascience Core, Genetics Epidemiology Core, Medical Informatics Core, and the Clinical Studies Core.

The major goals of the ICTR are to:

Catalyze interdisciplinary, collaborative clinical and translational research
Create a robust, readily accessible infrastructure to support multidisciplinary, collaborative clinical and translational research
Attract, educate, and train individuals in clinical, translational, and collaborative research
Improve human health and healthcare practice

ICTR Core Service(s) Request - Mark all that apply:

ICTR Clinical Studies Core

The mission of the Clinical Studies Core is to assist investigators with designing and conducting rigorous clinical research studies that advances scientific knowledge and improve care delivered to patients. The team has extensive experience in successful implementation, conduct, and conclusion of clinical trials - both industry sponsored and investigator-initiated trials.

ICTR Clinical Studies Core

ICTR Clinical Studies Core Consultation

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ICTR Computational Design Core

The mission of the Computational Design Core is to extract data from broadly available repositories, including Omics databases, and conduct preliminary analysis to determine relevance and fine-tune the research questions of clinical or biological studies. The core will help researchers optimize study design and analysis and evaluate data interpretability to produce clear and meaningful results.

ICTR Computational Design Core

ICTR Computational Design Core Consultation

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ICTR Data Science Core

ICTR Data Science Core provides end-to-end bioinformatic data analysis services, with emphases on data-driven methods and applications.

Our group has extensive experiences in data-intensive applications including data collection, retrieval, and management using web, cloud, and database based technologies and next generation sequencing data processing (e.g. WGS, WES, RNA-Seq, SCS, Microbiome) and associated downstream data analysis (e.g., annotation, copy number variation, differential gene expression). We can also provide web-based data visualization and develop customized data processing pipelines and software applications.

ICTR Data Science Core - Mark all that apply:

Data Acquisition

Next Gen Sequencing

Bulk Data Processing

Data Analysis

Software Development

Data Visualization

Data Science Consultation

ICTR Genomic Bioinformatics Core

The mission of the Genomic Bioinformatics Core is to provide bioinformatic analytics for diverse types of genomic data. The team experts can help users interpret data and provide text for manuscripts and grant preparation.

ICTR Genomic Bioinformatics Core - Mark all that apply:

Bulk RNA-seq data analysis: read alignment, quality control, differential expression, gene set enrichment analysis.

WES data analysis: read alignment, quality control, SNV calling.

scRNA-seq data analysis: read alignment, cell filtering, batch-effect correction and normalization, clustering analysis, annotation (for some datasets)

scATAC-seq data analysis: read alignment, peak calling.

scTCR-seq: identification of TCR cloe, clonality analysis.

ICTR Medical Informatics Core

The mission of the Medical Informatics Core is to provide access to local sources of big data and lend expertise in the form of consultation or collaboration in advanced methods to analyze these data. Through well-developed processes, the Core has access to BCM's Data Warehouse containing Baylor Medicine and Baylor St. Luke's data and BCM's 'Omics Data Lake as well as data from Texas Children's Hospital, Harris Health, the Michael E. DeBakey VA Hospital, BCM-Temple, National CommonSpirit Health, CommonSpirit Health-Texas Division, the National COVID Cohort Collaborative (N3C), and Epic Cosmos and serves as an honest data broker.

ICTR Medical Informatics Core

ICTR Medical Informatics Core Consultation

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Requester & Investigator Details

Date of Request:

Investigator

First Name:

Last Name

Investigator Email

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Investigator Phone Number

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Investigator Rank

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Other: Investigator Rank

Is ______ ______ the PI?

Yes

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PI First Name

PI Last Name

Are you currently a member of BCM Center?

* must provide value

Yes

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BCM Center

Institute for Clinical and Translational Research (ICTR)

Dan L. Duncan Comprehensive Cancer Center (DLDCCC)

Precision Environmental Health (PEH)

Center for Innovations in Quality, Effectiveness and Safety (IQuESt)

Other - specify

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DLDCCC program

Other DLDCCC Program

Are you a BCM Affiliate?

* must provide value

Yes

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BCM Department

Department of Medicine Section

Is this request associated with the LHB2 program?

Yes

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Department of Pediatrics Section

BCM Primary Location

Other BCM Location

Institution

Department

Project Information

Title of Project:

Brief description of project or research question

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Estimated Project Start Date (Y-M-D)

* must provide value

Y-M-D

Estimated Project End Date (Y-M-D)

* must provide value

Y-M-D

Deadline/Due Date (Y-M-D)

* must provide value

Y-M-D

Project Funding

Is this research effort part of an educational requirement for a Resident, Fellow, or other Learner?
Is the project currently funded?

If yes, please provide the level of learner

If yes, please provide the funding type:

BCM Internal/Intramural Funding

TCH Internal/Intramural Funding

Federal Sponsor

Industry Sponsor

Foundation

Federal Sponsor:

Industry Sponsor:

Foundation:

Funding Start Date (Y-M-D)

Y-M-D

Funding End Date (Y-M-D)

Y-M-D

If no, is this request for support for a grant application?

Yes

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Funding Agency/Sponsor

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Sponsor Due Date

* must provide value

Y-M-D

Additional Information:

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